The detailed information of tRNA gene sequence


Sequence ID>SRA1003443
Genome IDSRR002326.470124
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 118
End posion on genome 192
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcaaggcgt
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGTTCGATTC
CCTCCGCCCCTGCCA
Downstream region at tRNA end position 
ccatcatggc
Secondary structure (Cloverleaf model)
>SRA1003443	Trp	CCA
                   t      GCCA ccatcatggc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A        + | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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