The detailed information of tRNA gene sequence


Sequence ID>W1810199986
Genome IDPNRF01000007
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas endophytica MC28 [PNRF]
Start position on genome 216903
End posion on genome 216827
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgaaggccgg
tRNA gene sequence 
CGGGGTGTAGCGCAGTCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGGGTTCGAA
TCCCTCCACCCCGACCA
Downstream region at tRNA end position 
caacttactg
Secondary structure (Cloverleaf model)
>W1810199986	Pro	TGG
                   g      ACCA caacttactg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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