The detailed information of tRNA gene sequence


Sequence ID>SRA1003448
Genome IDSRR002326.477256
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 222
End posion on genome 298
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttagtttaC
tRNA gene sequence 
GGAGTTGTAGCTTAGTTGGCTCAAAGCGCCTGCCTGTCGAGCAGGAGATCGTGGGTTCGA
ATCCCATCAATTCCGAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1003448	Asp	GTC
                   C      GAnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     T - A
                     G - C          T A
                    T     T A C C C     A
    T T G A        A      + | | | |     G
  G         T T C G       G T G G G     C
  G         | | | |                 T T
  C         A A G C
    T C A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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