The detailed information of tRNA gene sequence


Sequence ID>SRA1003451
Genome IDSRR002326.477634
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 11
End posion on genome 104
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcaataaaac
tRNA gene sequence 
GGAGAGCTGGCCGAGTGGTCGAAGGCACTTCCCTGCTAAGGAAGCATACGGGCTTAACCC
TGTATCGAGGGTTCGAATCCCTCGTTCTCCGCCA
Downstream region at tRNA end position 
attacctagc
Secondary structure (Cloverleaf model)
>SRA1003451	Ser	GCT
                   c      GCCA attacctagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATACGGGCTTAACCCTGTATC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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