The detailed information of tRNA gene sequence


Sequence ID>W1810200809
Genome IDPNYA01000016
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesTrinickia dabaoshanensis GIMN1.004 [PNYA]
Start position on genome 94348
End posion on genome 94258
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcggctctc
tRNA gene sequence 
GGAGAGATGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTATAGGTTAATAACCT
ATCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gtcaagcttc
Secondary structure (Cloverleaf model)
>W1810200809	Ser	GGA
                   c      GCCA gtcaagcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G G G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TATAGGTTAATAACCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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