The detailed information of tRNA gene sequence


Sequence ID>SRA1003462
Genome IDSRR002326.483603
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 104
End posion on genome 179
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atagaattat
tRNA gene sequence 
GGGTTGCTAGCTCAATTGGCAGAGTACCGGCCTCCAAAGCCGTTGGTTCGGGGTTCGAGA
CCCTGGCAGCCCGCCA
Downstream region at tRNA end position 
tgctcctcta
Secondary structure (Cloverleaf model)
>SRA1003462	Trp	CCA
                   t      GCCA tgctcctcta
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C
                     C - G          A G
                    T     G T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | +                 T T
    G       G A G T
      C A          A     TGGTT
                    C   T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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