The detailed information of tRNA gene sequence


Sequence ID>SRA1003466
Genome IDSRR002326.485946
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 116
End posion on genome 29
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaaattaat
tRNA gene sequence 
GGAGTCGTGGTAGAGTGGCCTATTGCGCCGGACTTGAAATCCGGAGAGGGTAAAACCTCC
GTGAGTTCGAATCTCACCGACTCCGCCA
Downstream region at tRNA end position 
aacaatgttt
Secondary structure (Cloverleaf model)
>SRA1003466	Ser	TGA
                   t      GCCA aacaatgttt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A T G       G T G A G     C
    G       + | + |                 T T
    C       T T G C
      C T A        G     AGAGGGTAAAACCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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