The detailed information of tRNA gene sequence


Sequence ID>SRA1003470
Genome IDSRR002326.487914
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 296
End posion on genome 220
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
CGAGGCGTAGCGCAGCCTGGTAGCGTACTACCTTGGGGTGGTAGGGGTCGTGAGTTCAAA
TCTCGCCGCCTCGACCA
Downstream region at tRNA end position 
aagaagaccc
Secondary structure (Cloverleaf model)
>SRA1003470	Pro	GGG
                   t      ACCA aagaagaccc
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | + | | |     A
    C       C G C G       G T G A G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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