The detailed information of tRNA gene sequence


Sequence ID>SRA1003479
Genome IDSRR002326.492183
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 222
End posion on genome 146
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcgccatgc
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGCTAGAGCGCCGGTCTCCAAAACCGGAGGTTGAAGGTTCGAG
ACCCTCCACCCCTGCCA
Downstream region at tRNA end position 
aatatgacga
Secondary structure (Cloverleaf model)
>SRA1003479	Trp	CCA
                   c      GCCA aatatgacga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          A G
                    T     C T C C C     A
      T A A        A      | |   | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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