The detailed information of tRNA gene sequence


Sequence ID>SRA1003481
Genome IDSRR002326.493645
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 281
End posion on genome 207
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcctaaaata
tRNA gene sequence 
GGTCCTATAGCTCATTCGGTTAGAGCAACTGACTCATAATCAGTAGGTGCTTGGTTCGAT
TCCAAGTGGGACCACac
Downstream region at tRNA end position 
aaaaccatta
Secondary structure (Cloverleaf model)
>SRA1003481	Met	CAT
                   a      ACac aaaaccatta
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G A A C C     A
      T T A        A      | | | | |     G
    C       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTG
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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