The detailed information of tRNA gene sequence


Sequence ID>SRA1003484
Genome IDSRR002326.494663
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 220
End posion on genome 132
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agccaagttc
tRNA gene sequence 
GGAGAGATGGGTGAGTGGCTGAAACCAGTAGTTTGCTAAACTGCCGTAGCTCTAAAGGTT
ACCGGGGGTTCGAATCCCCCTCTCTCCACac
Downstream region at tRNA end position 
aggtaatatt
Secondary structure (Cloverleaf model)
>SRA1003484	Ser	GCT
                   c      ACac aggtaatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTAGCTCTAAAGGTTACC
                    G - C
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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