The detailed information of tRNA gene sequence


Sequence ID>SRA1003486
Genome IDSRR002326.498082
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 114
End posion on genome 38
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aagttccgga
tRNA gene sequence 
GGGTCTTTAGCTCAGCTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGATGGTTCGAG
TCCATCAAGACCCACCA
Downstream region at tRNA end position 
tagacgcgtg
Secondary structure (Cloverleaf model)
>SRA1003486	Ile	GAT
                   a      ACCA tagacgcgtg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     T - A          T G
                    T     C T A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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