The detailed information of tRNA gene sequence


Sequence ID>SRA1003509
Genome IDSRR002326.512061
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 175
End posion on genome 250
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
accaggattt
tRNA gene sequence 
AGGAAGTTAGCTCAGTTGGTAGAGCGTCTGCCTTACACGCAGAATGTCATCGGTTCAAGC
CCGGTACTTCCTACCA
Downstream region at tRNA end position 
aaatgtattg
Secondary structure (Cloverleaf model)
>SRA1003509	Val	TAC
                   t      ACCA aaatgtattg
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A          C G
                    T     T G G C C     A
      T G A        A      | + | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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