The detailed information of tRNA gene sequence


Sequence ID>SRA1003515
Genome IDSRR002326.518153
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 117
End posion on genome 30
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaaattaat
tRNA gene sequence 
GGAGTCGTGGTAGAGTGGCCTATTGCGCCGGACTTGAAATCCGGAGAGGGTAAAACCTCC
GTGAGTTCGAATCTCACCGACTCCGCCA
Downstream region at tRNA end position 
aacaattgtt
Secondary structure (Cloverleaf model)
>SRA1003515	Ser	TGA
                   t      GCCA aacaattgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A T G       G T G A G     C
    G       + | + |                 T T
    C       T T G C
      C T A        G     AGAGGGTAAAACCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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