The detailed information of tRNA gene sequence


Sequence ID>SRA1003516
Genome IDSRR002326.519908
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 39
End posion on genome 113
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atctttgtgg
tRNA gene sequence 
GGCGAAGTAGAGCAGCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACTGGTTCGATCC
CGGTCTTCGCAACTA
Downstream region at tRNA end position 
aaaatgactt
Secondary structure (Cloverleaf model)
>SRA1003516	Met	CAT
                   g      ACTA aaaatgactt
                     G   A
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          C T
                    T     T G G C C     A
        G A        A      | | + | |     G
      C     C G A G       A C T G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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