The detailed information of tRNA gene sequence


Sequence ID>SRA1003540
Genome IDSRR002327.12023
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 20
End posion on genome 109
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagccggagt
tRNA gene sequence 
GGAGAGATGACCGAGTGGTTGAAGGTGCTACTCTCGAAAAGTAGTGTGCTGGCAACGGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
caccatcaca
Secondary structure (Cloverleaf model)
>SRA1003540	Ser	CGA
                   t      GCCA caccatcaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TGTGCTGGCAACGGTACC
                    C - G
                    T - A
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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