The detailed information of tRNA gene sequence


Sequence ID>SRA1003550
Genome IDSRR002327.21362
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 49
End posion on genome 121
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tattaataaA
tRNA gene sequence 
TGTCAAGTAACATAATGGTAGTGTGTAGGTCTGCAAAATCTGAAGTAAGGGTTCGATTCC
CTTCTTGGCCTTta
Downstream region at tRNA end position 
ttaataaaag
Secondary structure (Cloverleaf model)
>SRA1003550	Cys	GCA
                   A      TTta ttaataaaag
                     T   C
                     G - C
                     T + G
                     C - G
                     A - T
                     A - T
                     G - C          T T
                    T     T T C C C     A
        A A        A      | | | | |     G
      T     T A C A       A A G G G     C
      G     + | | |                 T T
      G     G T G T
        T A        G     AAGT
                    T + G
                    A - T
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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