The detailed information of tRNA gene sequence


Sequence ID>SRA1003554
Genome IDSRR002327.27074
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 3
End posion on genome 79
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnac
tRNA gene sequence 
CGCGCGATGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAGGTTCAAA
TCCTACTCGCGCAACCA
Downstream region at tRNA end position 
acaagtcaac
Secondary structure (Cloverleaf model)
>SRA1003554	Met	CAT
                   c      ACCA acaagtcaac
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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