The detailed information of tRNA gene sequence


Sequence ID>SRA1003560
Genome IDSRR002327.32349
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 244
End posion on genome 157
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtaagtttt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGTACCTGACTCGAAATCAGGCGGGCGGTAACGCCTC
GGGGGTTCGAATCCCCCCCTCTCCTCCA
Downstream region at tRNA end position 
aatcagtgaa
Secondary structure (Cloverleaf model)
>SRA1003560	Ser	CGA
                   t      TCCA aatcagtgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | +                 T T
    T       A T G T
      T G A        A     CGGGCGGTAACGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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