The detailed information of tRNA gene sequence


Sequence ID>SRA1003561
Genome IDSRR002327.33245
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 191
End posion on genome 117
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atccgaatac
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCGTGGTTCGAG
TCCACGCAGGCCCACtg
Downstream region at tRNA end position 
tgactagcgg
Secondary structure (Cloverleaf model)
>SRA1003561	Ile	GAT
                   c      ACtg tgactagcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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