The detailed information of tRNA gene sequence


Sequence ID>SRA1003565
Genome IDSRR002327.35725
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 238
End posion on genome 162
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gctgtactnt
tRNA gene sequence 
CGGGGCGTGGCTCAGCCTGGTAGAGCGCCTGGTTCGGGACCAGGAGGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttcattgctt
Secondary structure (Cloverleaf model)
>SRA1003565	Pro	CGG
                   t      ACCA ttcattgctt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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