The detailed information of tRNA gene sequence


Sequence ID>SRA1003579
Genome IDSRR002327.42508
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 41
End posion on genome 128
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caggagcttg
tRNA gene sequence 
GGAGGGCTCGCATAGTGGCCGAGTGCGGCGGTCTTGAAAACCGCTAGGGGTGCAAGCTCC
TCATGGGTTCGAATCCCATGCCCTCCGCtg
Downstream region at tRNA end position 
aaaaccggga
Secondary structure (Cloverleaf model)
>SRA1003579	Ser	TGA
                   g      GCtg aaaaccggga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     T A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       A T G G G     C
    G       + | | |                 T T
    C       G T G C
      C G A        G     TAGGGGTGCAAGCTCCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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