The detailed information of tRNA gene sequence


Sequence ID>SRA1003592
Genome IDSRR002327.54698
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 25
End posion on genome 98
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcaaattttt
tRNA gene sequence 
AGGGGCGTAGCTTAGTGGTAAAGCTACGGTTTCCAAAACCGTCGATGGGGGTTCGATTCC
CTCCGCCCCTGCCA
Downstream region at tRNA end position 
ctcttgattt
Secondary structure (Cloverleaf model)
>SRA1003592	Trp	CCA
                   t      GCCA ctcttgattt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
        G A        A      | + | | |     G
      T     T T C G       G G G G G     C
      G     | | | |                 T T
      G     A A G C
        T A        T     CGAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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