The detailed information of tRNA gene sequence


Sequence ID>SRA1003608
Genome IDSRR002327.66910
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 167
End posion on genome 92
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attgataagt
tRNA gene sequence 
AGGGGCGTAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGATGGTTCGATT
CCTTCCGCCCCTGCCA
Downstream region at tRNA end position 
ccgatttctt
Secondary structure (Cloverleaf model)
>SRA1003608	Trp	CCA
                   t      GCCA ccgatttctt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C T T C C     A
      T A A        A      | |   | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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