The detailed information of tRNA gene sequence


Sequence ID>SRA1003609
Genome IDSRR002327.66935
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 259
End posion on genome 174
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttttgcagc
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGACTGTTACAGGTCC
GCGGGTTCGAATCCCCCACTCTCCGCat
Downstream region at tRNA end position 
taatgctaaa
Secondary structure (Cloverleaf model)
>SRA1003609	Ser	TGA
                   c      GCat taatgctaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
      T G A        G      |   | | |     G
    G       G A C G       G C G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTTACAGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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