The detailed information of tRNA gene sequence


Sequence ID>SRA1003627
Genome IDSRR002327.73282
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 199
End posion on genome 116
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gccgtcgcgg
tRNA gene sequence 
GCCCCCGTGGCGGAATGGTAGACGCGCTCGACTCAAAATCGAGTTCTGCAAGGAGTGTCC
GTTCGAGTCGGACCGGGGGCACCA
Downstream region at tRNA end position 
tccaccgcgg
Secondary structure (Cloverleaf model)
>SRA1003627	Leu	CAA
                   g      ACCA tccaccgcgg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C A G G C     A
      T A A        G      | | | | |     G
    G       G G C G       G T C C G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TTCTGCAAGGAGT
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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