The detailed information of tRNA gene sequence


Sequence ID>SRA1003663
Genome IDSRR002327.104193
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 181
End posion on genome 89
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcacgatcat
tRNA gene sequence 
GGATAAGAAGCGCTCCCCGGTGGGACGTCCGGTCTTCAAAACCGGAAGGGGCCGTTCGAC
GGTCCCTGGTGGGTTCGACTCCCACTCTTTTCCgcca
Downstream region at tRNA end position 
cctccgacgc
Secondary structure (Cloverleaf model)
>SRA1003663	SeC	TCA
                   t      gcca cctccgacgc
                     G - C
                     G - C
                     A - T
                     T   T
                     A - T
                     A - T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        G      | | | | |     G
    C       T C G C       G T G G G     C
    G       +   | |                 T T
    G       G A C G
      T G G        T     AAGGGGCCGTTCGACGGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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