The detailed information of tRNA gene sequence


Sequence ID>SRA1003666
Genome IDSRR002327.106293
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 193
End posion on genome 110
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gccgtcgcgg
tRNA gene sequence 
GCCCCCGTGGCGGAATGGTAGACGCGCTCGACTCAAAATCGAGTTCTGCAAGGAGTGTCC
GTTCGAGTCGGACCGGGGGCACCA
Downstream region at tRNA end position 
cccaacgcgg
Secondary structure (Cloverleaf model)
>SRA1003666	Leu	CAA
                   g      ACCA cccaacgcgg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C A G G C     A
      T A A        G      | | | | |     G
    G       G G C G       G T C C G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TTCTGCAAGGAGT
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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