The detailed information of tRNA gene sequence


Sequence ID>SRA1003667
Genome IDSRR002327.106485
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 137
End posion on genome 212
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cccattccac
tRNA gene sequence 
AGGCGTGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGATT
CCCTCCGCGCCTGCCA
Downstream region at tRNA end position 
acttaagttc
Secondary structure (Cloverleaf model)
>SRA1003667	Trp	CCA
                   c      GCCA acttaagttc
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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