The detailed information of tRNA gene sequence


Sequence ID>SRA1003676
Genome IDSRR002327.115536
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 213
End posion on genome 126
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcaagttac
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGTGTGTATATCGCAAGGTATC
GAGGGTTCGACTCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
ttattatgaa
Secondary structure (Cloverleaf model)
>SRA1003676	Ser	GGA
                   c      GCCA ttattatgaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T C
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATATCGCAAGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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