The detailed information of tRNA gene sequence


Sequence ID>SRA1003687
Genome IDSRR002327.123044
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 189
End posion on genome 264
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgacggtcat
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCTACGATGGCATTGTAGAGGTCAACGGTTCGATC
CCGTTAGGCTCCACCA
Downstream region at tRNA end position 
cccgnnnnnn
Secondary structure (Cloverleaf model)
>SRA1003687	Ala	GGC
                   t      ACCA cccgnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G + T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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