The detailed information of tRNA gene sequence


Sequence ID>SRA1003688
Genome IDSRR002327.123964
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 27
End posion on genome 116
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cggccctcgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGGCAGCCTCGAAAACTGCAGACCGGGAAACTGGT
TCCAGGGTTCAAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
aaagaaaaga
Secondary structure (Cloverleaf model)
>SRA1003688	Ser	CGA
                   c      GCCA aaagaaaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     A
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     AGACCGGGAAACTGGTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    C   A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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