The detailed information of tRNA gene sequence


Sequence ID>SRA1003705
Genome IDSRR002327.134032
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 95
End posion on genome 19
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcgatacaa
tRNA gene sequence 
GGCGGGGTAGCTCAGGTGGTTAGAGCACACGGCTCATAATCGTGGTGTCGCGGGTTCGAG
TCCCGCTCCCGCTACCG
Downstream region at tRNA end position 
ccacaggaca
Secondary structure (Cloverleaf model)
>SRA1003705	Met	CAT
                   a      ACCG ccacaggaca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     C G C C C     A
      G G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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