The detailed information of tRNA gene sequence


Sequence ID>SRA1003718
Genome IDSRR002327.143032
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 237
End posion on genome 147
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgagatgtgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGGCAAAACCGT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
ctgccagaat
Secondary structure (Cloverleaf model)
>SRA1003718	Ser	GGA
                   c      GCCA ctgccagaat
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGCAAAACCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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