The detailed information of tRNA gene sequence


Sequence ID>SRA1003734
Genome IDSRR002327.150987
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 158
End posion on genome 68
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
cgtgagtctc
tRNA gene sequence
GGAGAGATGGTTGAGCGGTTTAAGACGCACGCCTGGAAAGCGTGTGAGGGTTAACAGCCC
TCCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position
ggcaaaatca
Secondary structure (Cloverleaf model)
>SRA1003734	Ser	GGA
                   c      GCCA ggcaaaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T T G       G C G G G     C
    G         + | |                 T T
    T       A G A C
      T T A        G     TGAGGGTTAACAGCCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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