The detailed information of tRNA gene sequence


Sequence ID>SRA1003741
Genome IDSRR002327.157017
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 142
End posion on genome 216
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gtcccttagc
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGCCACCATGACACGGTGGAGGTCCCGGGTTCGAG
CCCCGTCGTGCCCACtt
Downstream region at tRNA end position 
gatacgtgcc
Secondary structure (Cloverleaf model)
>SRA1003741	Val	GAC
                   c      ACtt gatacgtgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A        | | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  A       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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