The detailed information of tRNA gene sequence


Sequence ID>SRA1003751
Genome IDSRR002327.163869
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 39
End posion on genome 115
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctcggcacc
tRNA gene sequence 
GGGCCTATAGCTCAATCGGTTAGAGCAGCTGACTCATAATCAGCAGGTCCTTGGTTCGAT
TCCAAGTGGGCCCACAA
Downstream region at tRNA end position 
ataaggtctg
Secondary structure (Cloverleaf model)
>SRA1003751	Met	CAT
                   c      ACAA ataaggtctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     G A A C C     A
      T A A        A      | | | | |     G
    C       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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