The detailed information of tRNA gene sequence


Sequence ID>SRA1003770
Genome IDSRR002327.173493
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 109
End posion on genome 183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtcgttcgg
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACac
Downstream region at tRNA end position 
ggatcgtcag
Secondary structure (Cloverleaf model)
>SRA1003770	Met	CAT
                   g      ACac ggatcgtcag
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    T       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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