The detailed information of tRNA gene sequence


Sequence ID>W1810232538
Genome IDPPCN01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseibium marinum DSM 17023 [PPCN]
Start position on genome 138967
End posion on genome 138892
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcctcgtgt
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGCGGGTTCGAAC
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
atttgctctt
Secondary structure (Cloverleaf model)
>W1810232538	Trp	CCA
                   t      GCCA atttgctctt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C A
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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