The detailed information of tRNA gene sequence


Sequence ID>SRA1003786
Genome IDSRR002327.184317
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 233
End posion on genome 144
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgccgactct
tRNA gene sequence 
GGAAGGTTGGCCGAGCGGTTTAAGGCACCGGTCTTGAAAACCGGCGAGGGCGCGAGTCTT
CCGTGAGTTCGAATCTCACACCTTCCGCCA
Downstream region at tRNA end position 
gattccgcgt
Secondary structure (Cloverleaf model)
>SRA1003786	Ser	TGA
                   t      GCCA gattccgcgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAGGGCGCGAGTCTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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