The detailed information of tRNA gene sequence


Sequence ID>W1810233319
Genome IDPPDJ01000008
Search identical group
Phylum/ClassBdellovibrionota
SpeciesHalobacteriovorax sp. DA5 [PPDJ]
Start position on genome 175377
End posion on genome 175290
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttcttaat
tRNA gene sequence 
GGAGAAGTGGGAGAGTGGCCGAATCCAGCACCTTGCTAAGGTGTCGTACCTCCGGGTACC
GCGAGTTCAAATCTCGCCTTCTCCGCCA
Downstream region at tRNA end position 
ttttaaaatt
Secondary structure (Cloverleaf model)
>W1810233319	Ser	GCT
                   t      GCCA ttttaaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     A
    G       G A G G       G C G A G     C
    G         | | |                 T T
    C       A T C C
      C G A        A     CGTACCTCCGGGTACC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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