The detailed information of tRNA gene sequence


Sequence ID>W1810233324
Genome IDPPDJ01000009
Search identical group
Phylum/ClassBdellovibrionota
SpeciesHalobacteriovorax sp. DA5 [PPDJ]
Start position on genome 197736
End posion on genome 197661
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttactttgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCGAAT
CCAGCCCCCGCAACCA
Downstream region at tRNA end position 
atttcttact
Secondary structure (Cloverleaf model)
>W1810233324	Met	CAT
                   t      ACCA atttcttact
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | + | | |     G
    T       C G A G       G T T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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