The detailed information of tRNA gene sequence


Sequence ID>SRA1003788
Genome IDSRR002327.186129
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 158
End posion on genome 69
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgagagtcct
tRNA gene sequence 
GGAGACGTGACCGAGTGGTCGAAGGTGCATGATTGGAAATCATGTGTGCCAGCAATGGTA
CCGAGGGTTCGAATCCCTCCGTCTCCTCAA
Downstream region at tRNA end position 
agtggttcga
Secondary structure (Cloverleaf model)
>SRA1003788	Ser	GGA
                   t      TCAA agtggttcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      C G A        G     TGTGCCAGCAATGGTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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