The detailed information of tRNA gene sequence


Sequence ID>SRA1003797
Genome IDSRR002327.189487
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 259
End posion on genome 170
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaaagattgc
tRNA gene sequence 
GGAAGGGTGGATGAGCGGTTTAAGTCATACGCCTGGAAAGCGTACGTAGGGTTATACCTA
CCGCGGGTTCGAATCCCGCCTCTTCCGCCA
Downstream region at tRNA end position 
gagaaaactc
Secondary structure (Cloverleaf model)
>SRA1003797	Ser	GGA
                   c      GCCA gagaaaactc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CGTAGGGTTATACCTACC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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