The detailed information of tRNA gene sequence


Sequence ID>SRA1003798
Genome IDSRR002327.189569
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 247
End posion on genome 174
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnggccctc
tRNA gene sequence 
GGGGCTTTAGCTCAATTGGTAGAGCGCCGCCTTTGCAAGGCGGAGGTCAGGAGTTCGATT
CTCCTAAGCTCCACtt
Downstream region at tRNA end position 
tggccatgca
Secondary structure (Cloverleaf model)
>SRA1003798	Ala	TGC
                   c      ACtt tggccatgca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          T T
                    T     T C C T C     A
      T A A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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