The detailed information of tRNA gene sequence


Sequence ID>W1810235919
Genome IDPPFX01000002
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesGeothermobacter hydrogeniphilus HR-1 [PPFX]
Start position on genome 154138
End posion on genome 154062
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttgtctgc
tRNA gene sequence 
AGGCCAGTAGCACAATTGGCTAGTGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctttaataac
Secondary structure (Cloverleaf model)
>W1810235919	Trp	CCA
                   c      GCCA ctttaataac
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C A C G       G G G G G     C
    G       | | | |                 T T
    G       G T G C
      C T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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