The detailed information of tRNA gene sequence


Sequence ID>W1810235935
Genome IDPPFX01000010
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesGeothermobacter hydrogeniphilus HR-1 [PPFX]
Start position on genome 57640
End posion on genome 57551
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aactgaatac
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGGCACCCTGCTAAGGTGTTGTACGGGCAACTGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttcacaac
Secondary structure (Cloverleaf model)
>W1810235935	Ser	GCT
                   c      GCCA gtttcacaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTACGGGCAACTGTACC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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