The detailed information of tRNA gene sequence


Sequence ID>SRA1003817
Genome IDSRR002327.204262
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 99
End posion on genome 177
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aattctcttt
tRNA gene sequence 
GGGGGGTTTAGGCTCAGTTGGCTAGAGCATCTGCCTTGCACGCAGAGGGTCATCGGTTCG
ACTCCGATATCCTCCACAA
Downstream region at tRNA end position 
caaattaatt
Secondary structure (Cloverleaf model)
>SRA1003817	Ala	TGC
                   t      ACAA caaattaatt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     G + T
                     T - A          T C
                    T     T A G C C     A
    G A C T        T      | | | | |     G
  T         C G G A       A T C G G     C
  T         |                       T T
  G         G A G C
    G C T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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