The detailed information of tRNA gene sequence


Sequence ID>SRA1003836
Genome IDSRR002327.220806
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 223
End posion on genome 136
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaaataaat
tRNA gene sequence 
AGAGAGGTGTCCGAGTGGTTGAAGGAGCTAGCCTGGAAAGCTAGTATGTGGGTAACTGCA
TCGTGGGTTCGAATCCCATCCTCTCTGCtg
Downstream region at tRNA end position 
aaaaattaat
Secondary structure (Cloverleaf model)
>SRA1003836	Ser	GGA
                   t      GCtg aaaaattaat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATGTGGGTAACTGCATC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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