The detailed information of tRNA gene sequence


Sequence ID>SRA1003837
Genome IDSRR002327.221353
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 43
End posion on genome 119
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaatatctgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
attttcgtag
Secondary structure (Cloverleaf model)
>SRA1003837	Met	CAT
                   t      ACCA attttcgtag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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